Scott Cain's website

Bioinformatics, Perl, Cool Stuff
Powered by Drupal, an open source content management system


Struggled with GBrowse2 and missing maize seqs

This week:

  • Struggled with getting GBrowse2 installed on Chado server. It isn't working and I think it is because the server has a rather odd hybrid of package managed and source installed software (3 hours)
  • While checking the loaded data for consistency, found that many (about 1/3) of the maize sequences are missing. Looking into where they might be obtained from (1 hour)
  • parsed and loaded sunflower contigs (2 hours)